PDB-CAT: A User-Friendly Tool to Classify and Analyze PDB Pro-tein-Ligand Complexes
Last updated
Last updated
PDB-CAT is a program that classifies a group of protein-ligand structures into three categories: apo, covalent bonded, and non-covalent bonded. Besides the classification, the program can verify if there are any mutations in the protein sequence by comparing it to a FASTA sequence.
It takes a few seconds
The script checks if the required directories exist. If they do not, it creates them automatically.
Here is where you should upload your cif files inside the cif-test folder!
Hover your mouse over the 'cif-test' folder and click the three-dot menu (or the options button) that appears next to it. From the dropdown menu, select the option to upload your files. Then, choose the files you want to upload from your computer and confirm the upload.
Make sure all cells have been executed by playing the ▶️ button!
And that's it! If your computer downloads the zip file containing the results, the program has been correctly executed.